Spring 2022
Fall 2021
The Graduate Student Travel Award Explained Estimating a Cost-Effective Individual Treatment Rule (CEITR) based on machine learning | September 13, 2021 3:30 PM |
Complex Systems Approaches to Cognition in Epilepsy | September 20, 2021 3:30 PM |
How the Kidney Negotiates a Tubule Packing Conflict During Development | September 27, 2021 3:30 PM |
Marker-free Biomechanical Analysis from Laboratory to Real World | October 4, 2021 3:30 PM |
Data Science Applications in Aeroecology: Using Weather Radar to Track Migrating Birds | October 11, 2021 3:30 PM |
The Delaware Microbiome Project | October 18, 2021 3:30 PM |
An Investigation into Opioid Prescriptions & ED Visits in Delaware The aging lens transcriptome in humans and mice: Implications for age related cataract | October 25, 2021 3:30 PM |
Control of Embryonic Genome Activation and Hierarchical Onset of Germ Layer Patterning | November 1, 2021 3:30 PM |
Text Mining for Scientific Discovery | November 8, 2021 3:30 PM |
Urinary biomarkers of chemical exposures in school-aged asthmatic children | November 15, 2021 3:30 PM |
| November 22, 2021 3:30 PM |
The Role of Exosomes in Marek's Disease Virus Vaccine Responses | November 29, 2021 3:30 PM |
Spring 2021
Introduction to Network Inference with Applications in Cancer Research | February 22, 2021 3:30 PM |
What are the Ethics of Data Science and Artificial Intelligence? | March 1, 2021 3:30 PM |
Modeling Latent Classes of Variation using High-throughput Data to Describe Hepatic Development in the Post-hatch Broiler Chick | March 8, 2021 3:30 PM |
Network Biology | March 17, 2021 11:15 AM |
Bioinformatics Alumni Career Panel | March 22, 2021 3:30 PM |
Genomics-powered approaches to domesticate anaerobic fungi for direct biomanufacturing from renewable plant biomass | March 29, 2021 3:30 PM |
Viral-host relationships in HIV: Who controls who? | April 5, 2021 3:30 PM |
Metabolic Heterogeneity and Antibiotic Tolerance in Bacterial Biofilms | April 12, 2021 3:30 PM |
| April 19, 2021 3:30 PM |
Improving the genomic knowledge and access to soybean root-nodulating bradyrhizobia | April 26, 2021 3:30 PM |
Unraveling the mechanism of 3D genome folding by high-throughput FISH | May 3, 2021 3:30 PM |
Bacterial growth and division control under stress | May 10, 2021 3:30 PM |
Global, organism-scale views of cell state heterogeneity & dynamics via novel single cell profiling techniques | May 17, 2021 3:30 PM |
Fall 2020
Fall 2020 | |
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Prediction Model for COVID-19 Patient Visits in the Ambulatory Setting | September 14, 2020 3:30 PM |
Molecular insights into wooden breast in broiler chickens suggest similar pathomechanism to diabetes mellitus Utilizing the genotypic features of phage replication modules to make sense of viral dark matter | September 21, 2020 3:30 PM |
RNASeq in Sey Mice suggests key Pathways in Aniridic Cataract Predictive Modeling of Opioid Epidemic in United States | September 28, 2020 3:30 PM |
Capturing mutations and their impact in Alzheimer's disease via text mining methods Whole-genome metagenomic analysis of the gut microbiome in horse keepers | October 5, 2020 3:30 PM |
A Brief Introduction to Viral Bioinformatics and its Applications from Lab to Field Studies | October 15, 2020 12:30 PM |
Genetic studies of developmental stuttering: From linkage analysis to next-generation sequence
| October 19, 2020 3:30 PM |
Tumor evolution at multiple dimensions | October 26, 2020 3:30 PM |
HIV latency, the major hurdle in HIV eradication; and the impact of cocaine on HIV gene expression and replication | November 2, 2020 3:30 PM |
Combinatorial Optimization for Computational Vaccine Design | November 12, 2020 2:30 PM |
Signaling Dynamics Directs Collective Cell Behavior: From Tissue Culture to Mouse Models | November 16, 2020 3:30 PM |
| November 23, 2020 |
Quantifying and Characterizing Cancer Cell Death Kinetics | November 30, 2020 3:30 PM |
Patterns of Metabolic Reprogramming in the Post-hatch Broiler Chick as Characterized by Integrated Correlation Analysis of High-Throughput Data Optogenetics Stimulation In Non-Invasive Skeletal Muscle Activation: Biomarker Identification Via Key Gene Expressions In Calcium Signaling Pathway | December 7, 2020 3:30 PM |
Spring 2020
Fall 2019
Spring 2019
Fall 2018
Fall 2018 | |
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This Looks Weird!: Size Homeostasis during Anomalous Bacterial Growth | September 10, 2018 3:30 PM |
Healthy lAIfe, AI for healthier lives | September 17, 2018 3:30 PM |
Molecular dynamics simulations of large macromolecular complexes | September 24, 2018 3:30 PM |
Pushing Science Frontiers through Computational and Data-enabled Research | October 1, 2018 3:30 PM |
Integration of Heterogeneous Data for Protein Ontology Database Using Semantic Web Technology | October 8, 2018 3:30 PM |
Supporting patient centered care through big data analytics | October 15, 2018 3:30 PM |
Systems-level investigation of multi-species bacterial interactions | October 22, 2018 3:30 PM |
Introduction to Biomedical and Health Informatics | October 29, 2018 3:30 PM |
The dynamic microbiome of bone marrow transplantation patients | November 5, 2018 3:30 PM |
Optogenetics for intracellular codebreaking: how ERK dynamics control gene expression and cell fate | November 12, 2018 3:30 PM |
Immersive Technologies and Interactive Games: | November 26, 2018 3:30 PM |
Methods and Applications of Long-read Sequencing in Medical Genomics | December 3, 2018 3:30 PM |
Spring 2018
Spring 2018 | |
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Single molecule imaging of gene fusion transcripts and RNA Trafficking | February 5, 2018 3:30 PM |
Gene Mutations & Cancer - The Rest of the Story | February 12, 2018 3:30 PM |
Identifying Key Gene Sets in Metastatic Dormancy; Ontology enrichment in publically available Human Breast Cancer data Probing breast cancer cell activation in response to microenvironment cues in well-defined synthetic extracellular matrices for insights into late recurrence | February 26, 2018 3:30 PM |
The development and function of aerial roots in plants | March 5, 2018 3:30 PM |
PerplExosomes: Elucidating the Complexity of Muscle Derived Extracellular Vesicles | March 12, 2018 3:30 PM |
The Promise of Precision Medicine in Pediatric Oncology: New Challenges and Hope | March 19, 2018 3:30 PM |
Biomarker analysis in cancer immunotherapy | April 2, 2018 3:30 PM |
Age-Associated Differentially Methylated Regions in the Human Genome and Maternal Age at Birth | April 9, 2018 3:30 PM |
MOLECULAR MECHANISM UNDERLYING ALS-LINKED FUS MUTATION | April 16, 2018 3:30 PM |
A Computational Approach to Characterizing Viral Communities of the Microbiome | April 23, 2018 3:30 PM |
The Ins and Outs of Bacterial Signaling | April 30, 2018 3:30 PM |
Chondro-protective Mechanism of Statin | May 7, 2018 3:30 PM |
Fall 2017
Fall 2017 | |
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Visualization of transcription dynamics in living Drosophila embryos | September 11, 2017 3:30 PM |
The Future of Data-Powered Health | September 20, 2017 4:00 PM |
iTextMine: Integrated Text Mining System for Large-Scale Knowledge Extraction from Literature | September 25, 2017 3:30 PM |
Precision Medicine meets imprecise medicine | October 2, 2017 3:30 PM |
Parallel Processing of the Genomes, by the Genomes and for the Genomes | October 17, 2017 10:15 AM |
Wilmington's Elevated Rates of Urban Firearm Violence and Opportunities for Prevention (A Predictability Model) | October 23, 2017 3:30 PM |
Mathematical and computational modeling of the tear film | October 30, 2017 3:30 PM |
Turing Large Healthcare Data into Clinical Intelligence | November 6, 2017 3:30 PM |
Rare cell variability in cancer therapy resistance | November 13, 2017 3:30 PM |
| November 20, 2017 |
Summer experience at Cold Spring Harbor Laboratory Design of a prokaryote-specific peptide array for analysis of bacterial kinomes | November 27, 2017 3:30 PM |
Liver Disease through Glycoscience Glasses | December 4, 2017 3:30 PM |
Spring 2017
Spring 2017 | |
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Multi-Scale Simulation of Breast Tissue | February 6, 2017 3:30 PM |
Utilizing Next Generation Sequencing to Generate Bacterial Genomic Sequences for Evolutionary Analysis | February 13, 2017 3:30 PM |
Student Meeting; closed seminar | February 20, 2017 3:30 PM |
Adam Marsh | February 27, 2017 3:30 PM |
Building the Internet of Tools With CyVerse: The Cloud Integrated RNA-Sequencing Platform fRNAkesneq | March 6, 2017 3:30 PM |
Programming Models and Tools for Bioinformatics | March 13, 2017 3:30 PM |
Predicting Protein-Protein Interaction Using Deep Learning Techniques | March 20, 2017 3:30 PM |
| March 27, 2017 |
Allen Hubbard | April 3, 2017 3:30 PM |
Computing Phenotypes from Electronic Health Records | April 10, 2017 3:30 PM |
Rethinking drug treatment rationale with biomedical mechanism-based phenotype descriptions | April 17, 2017 3:30 PM |
Dynamics and evolution of translational regulation | April 24, 2017 3:30 PM |
Comparison of Allele Specific Expression in Various Tissues of Chickens | May 1, 2017 3:30 PM |
Sufficient Dimension Reduction with Simultaneous Variable Selection in Application to Tumor Diagnosis | May 8, 2017 3:30 PM |
Fall 2016
Fall 2016 | |
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Summer Internship @ Google Cambridge Summer Internship @ IBM Almaden Research Center | September 12, 2016 3:30 PM |
Development of a Scalable Method for Creating Food Groups Using the NHANES Dataset and MapReduce | September 19, 2016 3:30 PM |
Using Machine Learning Techniques to Analyze Electronic Health Records for Patients Risk Stratification
| September 26, 2016 3:30 PM |
GenPro Summer Internship: Enhancing Functional Annotation of Methylation Sites Summer Internship at Genome Profiling, LLC | October 3, 2016 3:30 PM |
Integrative Network Analytics for Insights Generation from Massive Healthcare Data | October 10, 2016 3:30 PM |
Looking to metabolism in order to revitalize our antibiotic medicine cabinet | October 17, 2016 3:30 PM |
What makes T cells tick? Modeling the immune system across multiple spatio-temporal scales | October 24, 2016 3:30 PM |
In Search of the Gravitome: Candidate Gravity Responsive Gene Networks | October 31, 2016 3:30 PM |
System Genetics Approaches to Understand Metabolic Diseases | November 7, 2016 12:00 PM |
Cryptic light-enhanced growth in heterotrophic bacteria
| November 7, 2016 3:30 PM |
Identification and functional study of nucleosome-depleting factors | November 14, 2016 3:30 PM |
| November 21, 2016 |
A Network Visualization of Dinaciclib and its Interactions with Different Proteins and Target Kinases The Evolution of Biological Electron Transfer: Conservation of Sequence Determinants of the Reduction Potential in Bacterial Ferredoxins | November 28, 2016 3:30 PM |
Translating Cancer Genomics into Precision Oncology | December 5, 2016 3:00 PM |
Got Data? Building A Sustainable Data Ecosystem | December 6, 2016 2:00 PM |
Spring 2016
Spring 2016 | |
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Accurate Scoring of Drug Conformations at the Extreme Scale | February 8, 2016 3:30 PM |
Vascular Trees and the Machine Learning Strategy on Manifold | February 15, 2016 3:30 PM |
No Seminar | February 22, 2016 |
Integrated Approach to Decipher Regulatory Networks in Eye and Craniofacial Morphogenesis and Their Associated Defects | February 29, 2016 3:30 PM |
Comparative analysis of reproductive 21-nt phased siRNAs (phasiRNAs) in rice Multiscale Investigation of Histone Modifications: Spatiotemporal Dynamics and Epigenetic Memory Levels | March 7, 2016 3:30 PM |
miTRATA: a web-based tool for microRNA Truncation and Tailing Analysis Phased, secondary siRNAs in non-grass monocots | March 14, 2016 3:30 PM |
Presence of pathogenic Escherichia coli is correlated with bacterial community diversity and composition on pre-harvest cattle hides | March 21, 2016 3:30 PM |
| March 28, 2016 |
| April 4, 2016 |
Tying Genome Variation in Regulatory Regions to Neurodegenerative Phenotypes | April 7, 2016 2:00 PM |
How to Interact with a Distinguished Seminar Speaker
| April 11, 2016 3:30 PM |
Biological Switches and Modularity in Theory and Practice | April 18, 2016 3:30 PM |
Tapping the Marine RNA Genome Pool | April 25, 2016 3:30 PM |
Digital biological signaling: pulsatile dynamics in the DNA damage response | May 2, 2016 3:30 PM |
CANCELED | May 9, 2016 3:30 PM |
Excitable and other dynamic behaviors in migrating cells | May 16, 2016 3:30 PM |
Fall 2015
Fall 2015 | |
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First Passage Times and Relaxation Times in Biological Stochastic Processes | December 7, 2015 |
Computational Approaches for Cancer: Insight into Recent Developments | November 30, 2015 |
fRNAkenseq: a Web-based RNA Sequencing Analysis Application Developed with the iPlant Collaborative An Automated Thermo-align Approach for Identifying Template Specific Primers and Hybridization Oligos in (repetitive) Genomes | November 16, 2015 |
From Data to Knowledge: The complex relationship between science and technology | November 9, 2015 |
Screening of NSD1 Inhibitors for Pediatric Acute Myeloid Leukemia Based on Compound Selectivity and Binding Affinity Data-Driven In silico Screening of Small molecule inhibitors for NSD1 protein | November 2, 2015 |
What if we ignore the random effects when analyzing RNA-seq data in a multi-factor experiment? | October 29, 2015 2:00 PM |
At the Intersection of the Laboratory and Big Data: Systems and People in Biopharmaceutical Research and Development | October 19, 2015 |
Stochasticity and the Mechanism of Precision in the Vertebrate Segmentation Clock | October 12, 2015 |
Synthetic Biology: From Parts to Modules to Therapeutic Systems | October 7, 2015 3:30 PM |
Regulation of Transcription and RNA Processing in Single Cells: Understanding Heterogeneity in Gene Expression | October 5, 2015 |
Establishing the Chinese Hamster Genome as the Reference for the CHO Community Mining for Datasets to be used in a DREAM Challenge | September 28, 2015 |
Chromosome Structure and Gene Regulation in C. elegans | September 21, 2015 |
What It's Really Like To Be A Google Intern Working as a Ph.D. Student vs. as a Google Intern | September 14, 2015 |
| May 18, 2015 3:30 PM |
Following the Heart: Computational Methods in the Context of Cardiovascular Conditions | May 11, 2015 3:30 PM |
From Retrieval to Discovery in Biomedicine | May 4, 2015 3:30 PM |
Genomes Galore: Big Data Challenges in the Life Sciences | April 30, 2015 10:30 AM |
Genome-wide pathway analysis to decipher the shared genetic basis of neuropsychiatric disorders | April 28, 2015 9:30 AM |
Bioinformatics in Medicine: The Age of Omics | April 20, 2015 3:30 PM |
A mechanical "clock" serves as a master regulator of lung branching morphogenesis | April 13, 2015 3:30 PM |
From flies to humans: Stochastic specification of color-detecting photoreceptors | April 6, 2015 3:30 PM |
| March 30, 2015 |
Memory & Bacterial Growth in Fluctuating Environments | March 23, 2015 3:30 PM |
Beyond single pathogens: how the human microbiome impacts health and disease. | March 16, 2015 3:30 PM |
Mathematical Modeling Tools for HIV Cure Strategies | March 9, 2015 3:30 PM |
Precision and Reproducibility in Development | March 2, 2015 3:30 PM |
Enabling Scalable Data Analysis of Large Computational Structural Biology Datasets on Distributed Memory Systems | February 23, 2015 3:30 PM |
Integrative Multi-scale Analysis in Biomedical Informatics | February 17, 2015 10:30 AM |
Bioinformatics Core: CBCB Resources for Informatically Enabling Your Research | February 9, 2015 3:30 PM |
WebGIVI: A Website Visualization of Gene and iTerm VIROME and MgOl: Optimizing Functionality by Leveraging Metadata | December 1, 2014 3:30 PM |
How results from large scale genetic analysis inform on disease | November 24, 2014 3:30 PM |
Regulatory Bioinformatics - Assessments Supporting Worldwide GMO Submissions | November 17, 2014 3:30 PM |
Origins and propagation of transcriptional noise in eukaryotic gene expression | November 10, 2014 3:30 PM |
Worms in Space: Epigenetic Response of C. elegans in Simulated Microgravity | November 3, 2014 3:30 PM |
The role of water in cell mechanics, cell shape and cell motility | October 27, 2014 3:30 PM |
Simulating life - how computers are shaping biomedical research | October 20, 2014 3:30 PM |
Model-Based Engineering of Microorganisms | October 13, 2014 3:30 PM |
Prevention and Rehabilitation for Post-Traumatic Osteoarthritis | October 6, 2014 3:30 PM |
Science at Extreme Scale: Big Data and Big Compute | October 2, 2014 10:30 AM |
More than skin deep: Exploring the connection between bacterial community diversity & pathogenic E. coli on pre-harvest cattle hides From Metagenomes to Marker Genes: Using Informatics and Genomics to Characterize Phage Populations | September 22, 2014 3:30 PM |
What It's Really Like To Be A Google Intern Mining Metagenomes for Mycological Relevance - Finding Fungal Functions within Environmental Samples | September 15, 2014 3:30 PM |
Alzheimer's Disease: A Genomics Approach | September 8, 2014 3:30 PM |
Spring 2015
Fall 2014-Spring 2015 | |
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| May 18, 2015 3:30 PM |
Following the Heart: Computational Methods in the Context of Cardiovascular Conditions | May 11, 2015 3:30 PM |
From Retrieval to Discovery in Biomedicine | May 4, 2015 3:30 PM |
Genomes Galore: Big Data Challenges in the Life Sciences | April 30, 2015 10:30 AM |
Genome-wide pathway analysis to decipher the shared genetic basis of neuropsychiatric disorders | April 28, 2015 9:30 AM |
Bioinformatics in Medicine: The Age of Omics | April 20, 2015 3:30 PM |
A mechanical "clock" serves as a master regulator of lung branching morphogenesis | April 13, 2015 3:30 PM |
From flies to humans: Stochastic specification of color-detecting photoreceptors | April 6, 2015 3:30 PM |
| March 30, 2015 |
Memory & Bacterial Growth in Fluctuating Environments | March 23, 2015 3:30 PM |
Beyond single pathogens: how the human microbiome impacts health and disease. | March 16, 2015 3:30 PM |
Mathematical Modeling Tools for HIV Cure Strategies | March 9, 2015 3:30 PM |
Precision and Reproducibility in Development | March 2, 2015 3:30 PM |
Enabling Scalable Data Analysis of Large Computational Structural Biology Datasets on Distributed Memory Systems | February 23, 2015 3:30 PM |
Integrative Multi-scale Analysis in Biomedical Informatics | February 17, 2015 10:30 AM |
Bioinformatics Core: CBCB Resources for Informatically Enabling Your Research | February 9, 2015 3:30 PM |
WebGIVI: A Website Visualization of Gene and iTerm VIROME and MgOl: Optimizing Functionality by Leveraging Metadata | December 1, 2014 3:30 PM |
How results from large scale genetic analysis inform on disease | November 24, 2014 3:30 PM |
Regulatory Bioinformatics - Assessments Supporting Worldwide GMO Submissions | November 17, 2014 3:30 PM |
Origins and propagation of transcriptional noise in eukaryotic gene expression | November 10, 2014 3:30 PM |
Worms in Space: Epigenetic Response of C. elegans in Simulated Microgravity | November 3, 2014 3:30 PM |
The role of water in cell mechanics, cell shape and cell motility | October 27, 2014 3:30 PM |
Simulating life - how computers are shaping biomedical research | October 20, 2014 3:30 PM |
Model-Based Engineering of Microorganisms | October 13, 2014 3:30 PM |
Prevention and Rehabilitation for Post-Traumatic Osteoarthritis | October 6, 2014 3:30 PM |
Science at Extreme Scale: Big Data and Big Compute | October 2, 2014 10:30 AM |
More than skin deep: Exploring the connection between bacterial community diversity & pathogenic E. coli on pre-harvest cattle hides From Metagenomes to Marker Genes: Using Informatics and Genomics to Characterize Phage Populations | September 22, 2014 3:30 PM |
What It's Really Like To Be A Google Intern Mining Metagenomes for Mycological Relevance - Finding Fungal Functions within Environmental Samples | September 15, 2014 3:30 PM |
Alzheimer's Disease: A Genomics Approach | September 8, 2014 3:30 PM |