Analysis Services

Data-centric approaches, including omics and imaging technologies, have changed the way that life science and biomedical research is done.  Advances in data science including AI/machine learning-based approaches like large language models, protein language models, and generative AI are also poised to further change the face of life science research in the coming years.  Our bioinformatics data science experts are prepared to assist with your data analysis and interpretation needs.  Fee Schedule

Omics Analysis

The BDS Core is equipped to handle any form of omics analysis.  We have in house analysis pipelines for common NGS data types and are happy to devise custom analysis workflows to meet your omics analysis needs.  Among the omics analysis services we provide:

  • Genome Analysis
    • De Novo Genome Assembly & Annotation
    • SNP/InDel, Structural Variant, Copy Number Variant
  • Transcriptomic Analysis
    • Bulk and Single Cell RNAseq
    • Spatial Transcriptomics
    • Small/Micro RNA analysis
  • Proteomic Analysis
  • Epigenomic Analysis
    • ChIPseq, ATACseq, BisSeq, Other
  • Microbial Community/Virome Analysis
    • Amplicon Library (e.g. 16S rRNA)
    • Metagenomic and Metatranscriptomics Analysis
  • Omics Data Interpretation
    • Enrichment & Pathway Analysis
    • Data Visualization

Data Science-Enabled Approaches

Our experts and partners are able to help you apply advanced data science approaches and modeling to better understand your complex data.  These customized services include, but are not limited to:

  • Data and Literature Mining
  • Data Management and Database Development
  • Data Cleaning and Integration
  • Data Modeling and Prediction
  • Multi-Omics Integration
  • Protein Language Models
    (AlphaFold and Embedding-based Approaches)
  • Other Advanced Data Science Applications

Other Services

Our experts are able to offer services and assistance for a variety of other activities at the intersection of computational and life sciences.  These services include: 

  • General Bioinformatics Analysis
  • Submission of Data to Repositories (e.g. GenBank)
  • Custom Analysis Pipeline Development
  • Custom Scientific Coding Projects
  • Scientific Web Application Development and Hosting
  • One-on-One or Small Group Hands-On Training
  • Custom Training Workshops
  • Manuscript Support Services (review, visualizations)